Skip to content

Tweak defaults for CompartmentalModel.fit_mcmc() - #2563

Merged
martinjankowiak merged 2 commits into
devfrom
sir-tweak-defaults
Jul 16, 2020
Merged

Tweak defaults for CompartmentalModel.fit_mcmc()#2563
martinjankowiak merged 2 commits into
devfrom
sir-tweak-defaults

Conversation

@fritzo

@fritzo fritzo commented Jul 15, 2020

Copy link
Copy Markdown
Member

Addresses #2426

This tweaks .fit_mcmc() default parameters based on experiments in pyro-ppl/sandbox#13 and previous experiments by @martinjankowiak . the new default values are:

  • haar = True
  • haar_full_mass = 10

This PR also updates test_models.py to preserve coverage over the range of parameters, since the defaults have changed.

Tested

  • covered by existing tests in test_models.py

@martinjankowiak
martinjankowiak merged commit 924f5e2 into dev Jul 16, 2020
@fritzo
fritzo deleted the sir-tweak-defaults branch July 24, 2020 17:05
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants