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octantbio

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Overview
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README.md

Welcome to Octant's Github

Take a look at our newly released OCTOPUS 3.0 repo and associated blog post for an example of some of the work we've open sourced.

If you're interested in learning more about what we do, please head over to our website and contact us!

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SwabSeq SwabSeq Public

Jupyter Notebook 23 6
octopus3 octopus3 Public

A method for next-day high-throughput full plasmid sequencing from colonies

Python 8 1
mc4r-dms mc4r-dms Public

Code to reproduce the DMS of MC4R

R 3
bms-dms bms-dms Public

Deep mutational scanning to characterize the mechanistic role of TYK2 in immune signaling and disease

R 3 1
rho-dms rho-dms Public

Deep mutational scanning of human rhodopsin by MEE and Octant

R 2

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Showing 10 of 13 repositories

TS Public Forked from PatWalters/TS
Thompson Sampling

octantbio/TS’s past year of commit activity

Jupyter Notebook 0 MIT 22 0 0 Updated Jun 11, 2026
bms-dms Public
Deep mutational scanning to characterize the mechanistic role of TYK2 in immune signaling and disease

octantbio/bms-dms’s past year of commit activity

R 3 MIT 1 0 0 Updated Jun 5, 2026
t3-chomper Public Forked from OpenADMET/t3-chomper
Process data from a Pion Sirius T3

octantbio/t3-chomper’s past year of commit activity

Jupyter Notebook 1 MIT 1 0 0 Updated May 1, 2026
PyMolAI Public Forked from ravishar313/PyMolAI
PyMolAI provides Agentic interface to PyMol workflows, built on top of Open Source version of PyMol.

octantbio/PyMolAI’s past year of commit activity

C 0 384 0 0 Updated Feb 27, 2026
rho-dms Public
Deep mutational scanning of human rhodopsin by MEE and Octant

octantbio/rho-dms’s past year of commit activity

R 2 0 0 0 Updated Nov 21, 2025
mc4r-dms Public
Code to reproduce the DMS of MC4R

octantbio/mc4r-dms’s past year of commit activity

R 3 MIT 0 0 0 Updated Aug 22, 2025
gnm Public Forked from hturner/gnm
gnm package for generalized nonlinear models in R

octantbio/gnm’s past year of commit activity

R 0 GPL-2.0 7 0 0 Updated Mar 20, 2024
superset Public Forked from apache/superset
Apache Superset is a Data Visualization and Data Exploration Platform

octantbio/superset’s past year of commit activity

TypeScript 0 Apache-2.0 18,245 0 0 Updated Aug 26, 2023
octopus3 Public
A method for next-day high-throughput full plasmid sequencing from colonies

octantbio/octopus3’s past year of commit activity

Python 8 Apache-2.0 1 1 0 Updated Jun 15, 2023
octopus Public
A scalable cloning system

octantbio/octopus’s past year of commit activity

Python 25 Apache-2.0 1 5 1 Updated Jun 15, 2023

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