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Pull requests: brainglobe/cellfinder

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Pull requests list

Register the pretrained 2D models
#656 opened Aug 14, 2026 by aymuos15 Contributor 4/4 Loading…
Expose 2D/3D selection in the napari widgets
#655 opened Aug 14, 2026 by aymuos15 Contributor 3/4 Loading…
Add 2D network training to the train CLI
#654 opened Aug 14, 2026 by aymuos15 Contributor 2/4 Loading…
Support 2D cell candidate detection
#653 opened Aug 14, 2026 by aymuos15 Contributor 1/4 Loading…
Curated tiff directories in yaml file should be relative to yaml file
#634 opened Jun 28, 2026 by matham Contributor Loading…
4 of 7 tasks
Expose augmentation params in napari and cli
#632 opened Jun 22, 2026 by matham Contributor Loading…
5 of 7 tasks
Show number of cells already curated
#630 opened Jun 21, 2026 by matham Contributor Loading…
4 of 7 tasks
Pass cell metadata through napari.
#629 opened Jun 21, 2026 by matham Contributor Loading…
4 of 7 tasks
Log the proportion of cells classified
#628 opened Jun 21, 2026 by matham Contributor Loading…
3 of 7 tasks
Share workers between epochs
#627 opened Jun 21, 2026 by matham Contributor Loading…
3 of 7 tasks
Add status label below progress bar
#611 opened Mar 31, 2026 by sGTetjn Loading…
3 of 7 tasks
fix: allow detection-only runs without background channel
#610 opened Mar 29, 2026 by NiShITa-code Loading…
4 of 7 tasks
Fix kernel to be symetric and properly spheroid
#609 opened Mar 26, 2026 by matham Contributor Loading…
4 of 7 tasks
Remove unused detection constants
#604 opened Mar 14, 2026 by Gautghadi-1605 Loading…
1 of 4 tasks
Add tests for download CLI to improve coverage
#599 opened Mar 10, 2026 by mani6409 Loading…
Vectorize numpy operations in structure splitting
#592 opened Feb 19, 2026 by aymuos15 Contributor Draft
4 of 5 tasks
Add support for using center of intensity as cell centers
#591 opened Feb 13, 2026 by matham Contributor Loading…
4 of 7 tasks
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