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yarikopticeffigies
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[ENH] Make Pharmaceutical metadata terms less PET-specific (#2294)
* RF: PharmaceuticalDoseAmount - shift mentioning of a "tracer" into PET use We are to introduce use of Pharma* fields into BEP032 where it has no notion of tracers. I am moving this extra description to become PET specific, but also PET people might want to double check if that is what was actually intended (or it could be administered separate from the tracer * Fix DICOM tag for Intervention Drug Dose Co-authored-by: Chris Markiewicz <markiewicz@stanford.edu> * fix: use 0018 not 0008 section for Drug DICOM fields and format consistently with others and hyperlink * Also move "tracer" mentioning into addendum for PharmaceuticalName --------- Co-authored-by: Chris Markiewicz <markiewicz@stanford.edu>
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src/schema/objects/metadata.yaml

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@@ -2842,7 +2842,7 @@ PharmaceuticalDoseAmount:
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name: PharmaceuticalDoseAmount
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display_name: Pharmaceutical Dose Amount
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description: |
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Dose amount of pharmaceutical coadministered with tracer.
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Dose amount of administered pharmaceutical.
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anyOf:
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- type: number
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- type: array
@@ -2885,7 +2885,7 @@ PharmaceuticalName:
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name: PharmaceuticalName
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display_name: Pharmaceutical Name
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description: |
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Name of pharmaceutical coadministered with tracer.
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Name of pharmaceutical.
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type: string
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PhaseEncodingDirection:
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name: PhaseEncodingDirection

src/schema/rules/sidecars/pet.yaml

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@@ -123,18 +123,21 @@ PETPharmaceuticals:
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PharmaceuticalName:
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level: recommended
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description_addendum: |
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Corresponds to [DICOM Tag 0008, 0034](https://dicomlookup.com/dicomtags/(0008,0034)) `Intervention Drug Name`.
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For pharmaceutical co-administered with tracer.
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Corresponds to [DICOM Tag 0018, 0034](https://dicomlookup.com/dicomtags/(0018,0034)) `Intervention Drug Name`.
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PharmaceuticalDoseAmount:
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level: recommended
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description_addendum: |
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Corresponds to [DICOM Tag 0008, 0028](https://dicomlookup.com/dicomtags/(0008,0028)) `Intervention Drug Dose`.
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For pharmaceutical co-administered with tracer.
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Corresponds to [DICOM Tag 0018, 0028](https://dicomlookup.com/dicomtags/(0018,0028)) `Intervention Drug Dose`.
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PharmaceuticalDoseUnits: recommended
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PharmaceuticalDoseRegimen: recommended
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PharmaceuticalDoseTime:
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level: recommended
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description_addendum: |
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Corresponds to a combination of DICOM Tags (0008,0027) `Intervention Drug Stop Time`
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and (0008,0035) `Intervention Drug Start Time`.
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Corresponds to a combination of DICOM Tags
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[0018, 0027](https://dicomlookup.com/dicomtags/(0018,0027)) `Intervention Drug Stop Time` and
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[0018, 0035](https://dicomlookup.com/dicomtags/(0018,0035)) `Intervention Drug Start Time`.
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Anaesthesia: optional
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PETTime:

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