Basic Cleanup Missing from DeDriftAndResamplePipeline

[glasserm]

HCPpipelines/DeDriftAndResample/DeDriftAndResamplePipeline.sh

Line 493 in cf71031

# Resample (and resmooth) TS from Native

This pipeline needs the same thing as fMRISurface:

HCPpipelines/fMRISurface/scripts/CreateDenseTimeseries.sh

Lines 93 to 96 in cf71031

	#Basic Cleanup
	rm "$NameOffMRI"_AtlasSubcortical_s"$SmoothingFWHM".nii.gz
	rm "$NameOffMRI"_s"$SmoothingFWHM".atlasroi.L."$LowResMesh"k_fs_LR.func.gii
	rm "$NameOffMRI"_s"$SmoothingFWHM".atlasroi.R."$LowResMesh"k_fs_LR.func.gii

HCPpipelines/fMRISurface/scripts/SurfaceSmoothing.sh

Lines 66 to 67 in cf71031

	#Basic Cleanup
	rm "$NameOffMRI"."$Hemisphere".atlasroi."$LowResMesh"k_fs_LR.func.gii

[glasserm]

Misha, please address this issue when you implement longitudinal MSMAll.